Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846643.1_cds_XP_016509741.1_22647
CDS Infomation

[gene=LOC107827168] [db_xref=GeneID:107827168] [protein=signal recognition particle receptor subunit alpha-like] [protein_id=XP_016509741.1] [location=join(15774..16732,17348..17432,17666..17761,18818..18970,19051..19158,19238..19357,19529..19654,19743..19826,19954..20079)] [gbkey=CDS]
Sequence

ATGTTAGAGCAGTTACTGATATTCACTAGAGGGGGTTTGATCCTCTGGACATGTAAAGAG
CTTGGAAATGCTCTTAGAGGCTCCCCAATTGACACATTGATTCGTTCATGTCTTTTGGAG
GAACGTTCAGGTGCTGCATCATACAATTATGATGTTACTGGAGCTGCATACACTCTTAAA
TGGACTTTCCACAATGAACTGGGGCTTGTTTTCGTCGCTGTGTATCAGCGGATTCTCCAT
CTTTTGTATGTGGATGAGTTGCTTGCTATGGTTAAACGTGAATTCTCTGAGATTTATGAT
CCCAAAAAGACTGTATACAATGAATTTGATGATATTTTCCAGCAGCTCCGGAAAGAGGCC
GAGGCTCGTGCTGAGGATATCAAGAAATCGAAGCAGGTGGCAAAGCCTGTCACCAATAAT
CTTGGTAAGAAGCAAGGACAGGTGCAAAAGGGTGGTACTGATGGAGGCAACAATAAAACG
GGTGGTAGTGATTCAGGAAATGATGGTGGAGATGGTGATAAAGTGAAAGGGGATGTTAAG
GAGAATGGACATTCTAACGGAAGTATTGTAAATGGAGTAGTGCAGGTTAACGGTAAAGAG
AACAGGAATTCCGTGGCTGGGCCTTTTGATGTAAATAAGCTACAGAAGCTCAGGGCTAAA
GGTGGAAAGAAAGCAGATACTGTTGTAAACAAAGGTTCCAAGGCAGAGCCTACAAAAAAG
ATAAAGAAGAATCGAGTTTGGGACGATTCACCTTCTGAGCCAAAATTAGATTTCACAAAA
CCTGTGAGTGAGAATGGGAATGAGAATGTGACAGTTGTGGAAGCAGAACAAGGTGACAGT
ATGATGGACAAAGAGGAGATCTTGAGTAGTGATAGTGAGACCGAGGATGATGAAGAACCG
GGAAAAGACAACAAGGTTGAAGCAAAGAAGAAAGGCTGGTTCTCATCCATGTTCCAGAGT
ATCGCAGGTAAGGCAAACTTGGAGAAGACTGACCTGGAACCAGCTTTGAAAGCTCTTAAG
GACAGGCTGATGACCAAGAATGTTGCTGAGGAAATAGCTGAAAAGCTGTGCGAATCAGTT
GCAGCATGTCTGGAGGGTAAAAAACTTGCCTCATTTACAAGAATATCTTCAACAGTTCAG
GCAGCAATGGAGGAGGCTCTTGTCCGCATCTTGACTCCCAAGCGCTCCATTGATATTCTA
AGGGATGTTCATGCTGCAAAGGAACAAGGAAAACCATATGTTGTGGTTTTTGTTGGAGTT
AATGGAGTTGGAAAATCTACCAATCTTGCTAAGGTTGCTTATTGGCTTTTGCAGCATAAT
ATCGATGTCATGATGGCTGCTTGTGATACATTCCGGTCAGGAGCAGTTGAACAGCTACGC
ACTCATGCACGTAGGCTTCAGATCCCAATAATTGAGAAGGGGTATGAGAAGGATCCTGCT
ATTGTTGCTAAAGAAGCAATTCAGGAGGCTAACCGAAATGGTTCGGATGTTGTTCTTGTT
GATACAGCTGGTCGGATGCAGGATAATGAACCATTGATGCGAGCATTGTCAAAGCTTATA
TATGTCAATAGTCCAGATCTGATCCTTTTTGTTGGAGAGGCACTTGTCGGCAATGATGCT
GTTGACCAACTGTCAAAGTTTAACCAGAAATTAGGTGACCTCTCACCCTCACCAAATCCG
AGGTTAATTGATGGAATTTTGCTGACCAAATTTGACACTATCGATGACAAAGTGGGTGCA
GCATTATCCATGGTTTACATATCCGGAGCCCCGGTTATGTTTGTGGGATGTGGACAGTCA
TATACTGACTTGAAGAAGCTGAATGTGAAGTCCATTGTCAAGACACTCCTCAAATGA

Peptide Sequence

PEP ID

XP_016509741.1
PEP Infomation

PREDICTED: signal recognition particle receptor subunit alpha-like [Nicotiana tabacum]
Sequence

MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDVTGAAYTLK
WTFHNELGLVFVAVYQRILHLLYVDELLAMVKREFSEIYDPKKTVYNEFDDIFQQLRKEA
EARAEDIKKSKQVAKPVTNNLGKKQGQVQKGGTDGGNNKTGGSDSGNDGGDGDKVKGDVK
ENGHSNGSIVNGVVQVNGKENRNSVAGPFDVNKLQKLRAKGGKKADTVVNKGSKAEPTKK
IKKNRVWDDSPSEPKLDFTKPVSENGNENVTVVEAEQGDSMMDKEEILSSDSETEDDEEP
GKDNKVEAKKKGWFSSMFQSIAGKANLEKTDLEPALKALKDRLMTKNVAEEIAEKLCESV
AACLEGKKLASFTRISSTVQAAMEEALVRILTPKRSIDILRDVHAAKEQGKPYVVVFVGV
NGVGKSTNLAKVAYWLLQHNIDVMMAACDTFRSGAVEQLRTHARRLQIPIIEKGYEKDPA
IVAKEAIQEANRNGSDVVLVDTAGRMQDNEPLMRALSKLIYVNSPDLILFVGEALVGNDA
VDQLSKFNQKLGDLSPSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
YTDLKKLNVKSIVKTLLK

Transcript Sequence

Gene sequence data has not been registered.